dcsimg

Import Log for TreatmentBank

  • Started: February 10, 2022 15:50
  • Completed: 16:02:14.000
  • Failed: No.
  • Status: completed

Events (most recent first):

  • 16:02:14.000 (ends) Complete
  • 16:02:14.000 (ends) TOTAL TIME: 11.3m
  • 16:02:14.000 (starts) TraitBank::Denormalizer.update_resource_vernaculars
  • 16:02:14.000 (starts) Running
  • 16:02:07.000 (starts) Resource#fix_native_nodes
  • 16:02:07.000 (starts) Running
  • 16:02:07.000 (warns) Trait Publishing failed: At https://beta.eol.org/data/treatment_bank/publish_traits_1644244129_chunk_1.csv @ position 104696898 - Missing end for quote (") which started on line 173513 FROM /usr/local/bundle/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:560:in `merge_triple' << /app/lib/trait_bank/slurp.rb:447:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:447:in `each' << /app/lib/trait_bank/slurp.rb:447:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:331:in `block (2 levels) in load_csv'
  • 16:01:48.000 (warns) FAILED on build_nodes query (Trait), will re-try once...
  • 16:01:48.000 (warns) At https://beta.eol.org/data/treatment_bank/publish_traits_1644244129_chunk_1.csv @ position 104696898 - Missing end for quote (") which started on line 173513
  • 16:01:02.000 (warns) FAILED on build_nodes query (Page), will re-try once...
  • 16:01:02.000 (warns) At https://beta.eol.org/data/treatment_bank/publish_traits_1644244129_chunk_1.csv @ position 104696895 - Missing end for quote (") which started on line 173513
  • 16:00:55.000 (infos) Importing 250000 rows from publish_traits_1644244129_chunk_1.csv
  • 16:00:53.000 (warns) Found 1818377 rows, will break up into 250000
  • 16:00:53.000 (infos) adding new traits
  • 16:00:53.000 (infos) removing all traits
  • 16:00:53.000 (infos) Connecting to https://beta-repo.eol.org/ ...
  • 16:00:29.000 (infos) Connecting to https://beta-repo.eol.org/ ...
  • 16:00:29.000 (infos) polling for trait diff metadata: /resources/806/publish_diffs.json
  • 16:00:29.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo
  • 16:00:29.000 (starts) Running
  • 16:00:27.000 (starts) Fixing native nodes...
  • 16:00:27.000 (warns) Skipping reindexing. You should reindex soon.
  • 16:00:27.000 (infos) importing 795 Pages
  • 16:00:27.000 (infos) importing 1000 Pages
  • 16:00:26.000 (infos) importing 1000 Pages
  • 16:00:26.000 (infos) importing 1000 Pages
  • 16:00:26.000 (infos) importing 1000 Pages
  • 16:00:26.000 (infos) importing 1000 Pages
  • 16:00:26.000 (infos) importing 1000 Pages
  • 16:00:25.000 (infos) importing 1000 Pages
  • 16:00:25.000 (infos) importing 1000 Pages
  • 16:00:25.000 (infos) importing 1000 Pages
  • 16:00:25.000 (infos) importing 1000 Pages
  • 16:00:25.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:24.000 (infos) importing 1000 Pages
  • 16:00:23.000 (infos) importing 1000 Pages
  • 16:00:23.000 (infos) importing 1000 Pages
  • 16:00:23.000 (infos) importing 1000 Pages
  • 16:00:23.000 (infos) importing 1000 Pages
  • 16:00:23.000 (infos) importing 1000 Pages
  • 16:00:22.000 (infos) importing 1000 Pages
  • 16:00:22.000 (infos) importing 1000 Pages
  • 16:00:22.000 (infos) importing 1000 Pages
  • 16:00:22.000 (infos) importing 1000 Pages
  • 16:00:22.000 (infos) importing 1000 Pages